Repository Issue Activity (beta)

#2092 Every symbol in a `.F`/`.F90`/`.F95`/`.F03`/`.F08` file gets a wrong `source_location` — `cpp -P` renumbers lines with no way back

#2091 Default `dedup=True` discards a same-ID node's attributes instead of merging them — LLM semantic summaries are silently lost

#2067 --update silently deletes freshly extracted nodes for every changed file (prune_sources applied after build)

#2084 build_from_json() ghost-node merge collapses distinct document nodes sharing (basename, label)

#585 Question: How to combine several graphs into one?

#2062 graphify uninstall deletes user-written content

#2072 Scan root silently changes the graph: src-layout project loses most 'imports' edges, same node count, no warning

#2068 build_from_json's ghost-duplicate merge keys on bare filename, silently collapses unrelated same-named docs across corpora

#2073 --no-label persists placeholder names into .graphify_labels.json, permanently suppressing the free hub labeler

#2074 graphify path: non-deterministic shortest-path route + calls label not backed by any stored edge

#2090 graphify: melhorar localização por feature/string (ranking semântico + literais + granularidade)

#1255 fix: graphify install --project ships older references/query.md (103 lines, no Step 0 vocab expansion) vs graphify vscode install (249 lines)

#1220 Feature: literal/identifier usage index for string-coupling navigation

#2089 _rebuild_code indexes markdown by AST but the /graphify skill does not — the two corpora fight over the shrink-guard

#2088 graph.html: no way to tell calls from imports/contains at a glance

#1151 --update: build_merge(prune_sources=...) silently no-ops when root is not passed (absolute vs relative source_file mismatch, Windows)

#2086 Community-label split-retry starves its own base case: max_tokens shrinks with batch size, single-community retries get only 88 tokens

#1540 UX: `uv run --with graphifyy python -m graphify` silently loads an older system-installed version instead of the uv-managed one

#2082 Python: `from pkg import mod as alias` drops every downstream `alias.func()` call edge — unaliased form resolves fine

#2081 built_at_commit is read from CWD, not the extraction target — stamps graphs with an unrelated repo's commit (and fabricates one for non-git targets)

#2079 Bash: source "${VAR}/lib.sh" emits an unresolvable edge — sourced libraries appear orphaned

#2077 Record the backend and model in graph.json — a graph currently cannot be attributed to what produced it

#2076 claude-cli backend returns an agentic summary instead of JSON on Claude Code 2.1.216 (the llm.py:1376 workaround has regressed)

#2071 --code-only is missing from --help and the README

#1843 README troubleshooting recommends .claudeignore, which Claude Code does not support